Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Gm2651-201ENSMUST00000203560 838 ntBASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc3Q9CWU5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Gm27628-201ENSMUST00000184911 107 ntBASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc3Q9CWU5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Efs-202ENSMUST00000227037 2540 ntBASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Gm12350-201ENSMUST00000121208 462 ntBASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Khdc3Q9CWU5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms