Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Psmb5-202ENSMUST00000227257 622 ntBASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf135Q9CWS1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf135Q9CWS1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Gm6736-201ENSMUST00000166583 948 ntBASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf135Q9CWS1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.52■□□□□ 0.07
Rnf135Q9CWS1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Gm27702-201ENSMUST00000184512 56 ntBASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf135Q9CWS1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Gm12260-201ENSMUST00000122447 411 ntBASIC15.5■□□□□ 0.07
Rnf135Q9CWS1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms