Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.34■□□□□ 0.05
Gtf2ird2Q99NI3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Gtf2ird2Q99NI3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gtf2ird2Q99NI3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gtf2ird2Q99NI3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Gtf2ird2Q99NI3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2ird2Q99NI3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Gm9385-201ENSMUST00000117563 472 ntBASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Gm26308-201ENSMUST00000157768 69 ntBASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Chchd1-203ENSMUST00000224633 557 ntBASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2ird2Q99NI3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2ird2Q99NI3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms