Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm15483-201ENSMUST00000120338 456 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm11543-201ENSMUST00000120758 370 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Rprl2-201ENSMUST00000157150 290 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm9726-201ENSMUST00000180321 678 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm2451-201ENSMUST00000199447 999 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm10290-201ENSMUST00000200451 999 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Olfr286-202ENSMUST00000205305 969 ntBASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpgs1Q99MS8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpgs1Q99MS8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpgs1Q99MS8 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms