Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cdk5rap3Q99LM2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44357-201ENSMUST00000195897 142 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm19658-201ENSMUST00000196231 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44367-201ENSMUST00000196836 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44350-201ENSMUST00000197197 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44390-201ENSMUST00000197533 144 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44313-201ENSMUST00000198018 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44486-201ENSMUST00000198508 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44314-201ENSMUST00000199263 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44394-201ENSMUST00000199558 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44484-201ENSMUST00000199873 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44466-201ENSMUST00000200264 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm44359-201ENSMUST00000200671 138 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdk5rap3Q99LM2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdk5rap3Q99LM2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cdk5rap3Q99LM2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Cdk5rap3Q99LM2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdk5rap3Q99LM2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Gm6089-201ENSMUST00000197666 938 ntBASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap3Q99LM2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms