Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Mir6392-201ENSMUST00000184924 108 ntBASIC18.31■□□□□ 0.52
RtcbQ99LF4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.31■□□□□ 0.52
RtcbQ99LF4 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.31■□□□□ 0.52
RtcbQ99LF4 Gm9899-201ENSMUST00000065519 555 ntBASIC18.31■□□□□ 0.52
RtcbQ99LF4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.3■□□□□ 0.52
RtcbQ99LF4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.3■□□□□ 0.52
RtcbQ99LF4 Gm2451-201ENSMUST00000199447 999 ntBASIC18.3■□□□□ 0.52
RtcbQ99LF4 Gm10290-201ENSMUST00000200451 999 ntBASIC18.3■□□□□ 0.52
RtcbQ99LF4 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.3■□□□□ 0.52
RtcbQ99LF4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RtcbQ99LF4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.29■□□□□ 0.52
RtcbQ99LF4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Gm17150-201ENSMUST00000165577 381 ntBASIC18.29■□□□□ 0.52
RtcbQ99LF4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.29■□□□□ 0.52
RtcbQ99LF4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.29■□□□□ 0.52
RtcbQ99LF4 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.29■□□□□ 0.52
RtcbQ99LF4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RtcbQ99LF4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Gm15806-201ENSMUST00000120696 955 ntBASIC18.28■□□□□ 0.52
RtcbQ99LF4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.28■□□□□ 0.52
RtcbQ99LF4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.28■□□□□ 0.52
RtcbQ99LF4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RtcbQ99LF4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.27■□□□□ 0.52
RtcbQ99LF4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms