Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.05■□□□□ -0
Cdk9Q99J95 Gm14722-201ENSMUST00000118943 689 ntBASIC15.05■□□□□ -0
Cdk9Q99J95 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.05■□□□□ -0
Cdk9Q99J95 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cdk9Q99J95 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cdk9Q99J95 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Cdk9Q99J95 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.05■□□□□ -0
Cdk9Q99J95 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk9Q99J95 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Cdk9Q99J95 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Cdk9Q99J95 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.04■□□□□ -0
Cdk9Q99J95 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdk9Q99J95 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Cdk9Q99J95 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Cdk9Q99J95 Gm27704-201ENSMUST00000185094 107 ntBASIC15.04■□□□□ -0
Cdk9Q99J95 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.04■□□□□ -0
Cdk9Q99J95 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk9Q99J95 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdk9Q99J95 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Cdk9Q99J95 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.03■□□□□ -0
Cdk9Q99J95 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Cdk9Q99J95 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdk9Q99J95 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm8825-201ENSMUST00000182565 998 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm4518-201ENSMUST00000182638 718 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cdk9Q99J95 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.03■□□□□ -0
Cdk9Q99J95 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk9Q99J95 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms