Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Gm14140-201ENSMUST00000119999 995 ntBASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
Pcdhb1Q91Y08 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb1Q91Y08 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Psmb5-202ENSMUST00000227257 622 ntBASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms