Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb8Q91XZ2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhb8Q91XZ2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb8Q91XZ2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gm4899-201ENSMUST00000178708 719 ntBASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb8Q91XZ2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb8Q91XZ2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Gm13036-201ENSMUST00000117799 748 ntBASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb8Q91XZ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms