Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.02■□□□□ 0.31
Trex1Q91XB0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trex1Q91XB0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Shd-206ENSMUST00000225145 998 ntBASIC17.01■□□□□ 0.31
Trex1Q91XB0 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.01■□□□□ 0.31
Trex1Q91XB0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trex1Q91XB0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17■□□□□ 0.31
Trex1Q91XB0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trex1Q91XB0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Trex1Q91XB0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17■□□□□ 0.31
Trex1Q91XB0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Gm14719-201ENSMUST00000121891 340 ntBASIC17■□□□□ 0.31
Trex1Q91XB0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trex1Q91XB0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17■□□□□ 0.31
Trex1Q91XB0 Gm44616-201ENSMUST00000206417 1732 ntBASIC17■□□□□ 0.31
Trex1Q91XB0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17■□□□□ 0.31
Trex1Q91XB0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17■□□□□ 0.31
Trex1Q91XB0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trex1Q91XB0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trex1Q91XB0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trex1Q91XB0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.99■□□□□ 0.31
Trex1Q91XB0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trex1Q91XB0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms