Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.43■□□□□ 0.06
Trim60Q8VI40 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.43■□□□□ 0.06
Trim60Q8VI40 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim60Q8VI40 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trim60Q8VI40 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Gm12008-201ENSMUST00000117791 755 ntBASIC15.42■□□□□ 0.06
Trim60Q8VI40 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim60Q8VI40 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.42■□□□□ 0.06
Trim60Q8VI40 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.42■□□□□ 0.06
Trim60Q8VI40 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.42■□□□□ 0.06
Trim60Q8VI40 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim60Q8VI40 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.41■□□□□ 0.06
Trim60Q8VI40 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.41■□□□□ 0.06
Trim60Q8VI40 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim60Q8VI40 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim60Q8VI40 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms