Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc38Q8CDN8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc38Q8CDN8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gm12134-201ENSMUST00000122109 520 ntBASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc38Q8CDN8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc38Q8CDN8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc38Q8CDN8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc38Q8CDN8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms