Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4Q8BQZ5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gm37153-201ENSMUST00000193637 231 ntBASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4Q8BQZ5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm11764-201ENSMUST00000120221 623 ntBASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm4899-201ENSMUST00000178708 719 ntBASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4Q8BQZ5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4Q8BQZ5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm11779-201ENSMUST00000118541 368 ntBASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms