Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.72■□□□□ 0.11
Trpa1Q8BLA8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Gm8000-201ENSMUST00000188378 592 ntBASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Gm18246-201ENSMUST00000221023 728 ntBASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpa1Q8BLA8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trpa1Q8BLA8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trpa1Q8BLA8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpa1Q8BLA8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Gm14494-201ENSMUST00000118786 435 ntBASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Gm11594-201ENSMUST00000122313 162 ntBASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpa1Q8BLA8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trpa1Q8BLA8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms