Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Mir7654-201ENSMUST00000185082 70 ntBASIC20.9■□□□□ 0.94
Usp54Q8BL06 Gm9899-201ENSMUST00000065519 555 ntBASIC20.9■□□□□ 0.94
Usp54Q8BL06 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.9■□□□□ 0.94
Usp54Q8BL06 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp54Q8BL06 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 AC153962.4-201ENSMUST00000217878 242 ntBASIC20.89■□□□□ 0.94
Usp54Q8BL06 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.89■□□□□ 0.94
Usp54Q8BL06 AC154806.6-201ENSMUST00000228192 202 ntBASIC20.89■□□□□ 0.94
Usp54Q8BL06 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp54Q8BL06 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.89■□□□□ 0.93
Usp54Q8BL06 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp54Q8BL06 AY702102-202ENSMUST00000194651 1173 ntBASIC20.89■□□□□ 0.93
Usp54Q8BL06 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp54Q8BL06 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.88■□□□□ 0.93
Usp54Q8BL06 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Usp54Q8BL06 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp54Q8BL06 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Ighv1-25-201ENSMUST00000195638 345 ntBASIC20.87■□□□□ 0.93
Usp54Q8BL06 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp54Q8BL06 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Gm9002-201ENSMUST00000178437 499 ntBASIC20.86■□□□□ 0.93
Usp54Q8BL06 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms