Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2bQ8BJF9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2bQ8BJF9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gm10499-201ENSMUST00000174094 934 ntBASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2bQ8BJF9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm17807-201ENSMUST00000186869 298 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Carlr-201ENSMUST00000181515 2574 ntBASIC15.29■□□□□ 0.04
Chmp2bQ8BJF9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms