Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Gm8749-201ENSMUST00000117737 331 ntBASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slx4Q6P1D7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC22.66■■□□□ 1.22
Slx4Q6P1D7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Gm12742-201ENSMUST00000117326 410 ntBASIC22.65■■□□□ 1.22
Slx4Q6P1D7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Gm27839-201ENSMUST00000184242 106 ntBASIC22.65■■□□□ 1.22
Slx4Q6P1D7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC22.65■■□□□ 1.22
Slx4Q6P1D7 AC121804.3-201ENSMUST00000223420 295 ntBASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Slx4Q6P1D7 Gm45667-201ENSMUST00000210380 1316 ntBASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Gm27892-201ENSMUST00000185017 106 ntBASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Gm33320-201ENSMUST00000192232 530 ntBASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Gm8463-201ENSMUST00000208573 613 ntBASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Slx4Q6P1D7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Slx4Q6P1D7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Slx4Q6P1D7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm8835-201ENSMUST00000173096 1169 ntBASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm5279-201ENSMUST00000199575 745 ntBASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slx4Q6P1D7 Gm14452-201ENSMUST00000118680 1632 ntBASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC22.62■■□□□ 1.21
Slx4Q6P1D7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Mir1247-201ENSMUST00000116706 82 ntBASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Gm15460-201ENSMUST00000118147 391 ntBASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Gm6244-201ENSMUST00000178732 841 ntBASIC22.61■■□□□ 1.21
Slx4Q6P1D7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC22.61■■□□□ 1.21
Slx4Q6P1D7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms