Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ParpbpQ6IRT3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ParpbpQ6IRT3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ParpbpQ6IRT3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Gm18246-201ENSMUST00000221023 728 ntBASIC14□□□□□ -0.17
ParpbpQ6IRT3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14□□□□□ -0.17
ParpbpQ6IRT3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14□□□□□ -0.17
ParpbpQ6IRT3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14□□□□□ -0.17
ParpbpQ6IRT3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ParpbpQ6IRT3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms