Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ecm1Q61508 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ecm1Q61508 Gm14042-201ENSMUST00000120139 833 ntBASIC16.42■□□□□ 0.22
Ecm1Q61508 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.42■□□□□ 0.22
Ecm1Q61508 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Gm9182-201ENSMUST00000217829 639 ntBASIC16.42■□□□□ 0.22
Ecm1Q61508 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ecm1Q61508 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.42■□□□□ 0.22
Ecm1Q61508 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ecm1Q61508 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.42■□□□□ 0.22
Ecm1Q61508 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ecm1Q61508 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
Ecm1Q61508 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Prob1-201ENSMUST00000097619 3021 ntBASIC16.41■□□□□ 0.22
Ecm1Q61508 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Ecm1Q61508 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.41■□□□□ 0.22
Ecm1Q61508 Gm42612-201ENSMUST00000197986 623 ntBASIC16.41■□□□□ 0.22
Ecm1Q61508 Gm43170-201ENSMUST00000199827 612 ntBASIC16.41■□□□□ 0.22
Ecm1Q61508 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.41■□□□□ 0.22
Ecm1Q61508 Gm9229-201ENSMUST00000222777 126 ntBASIC16.41■□□□□ 0.22
Ecm1Q61508 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Ecm1Q61508 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ecm1Q61508 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.4■□□□□ 0.22
Ecm1Q61508 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ecm1Q61508 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.4■□□□□ 0.22
Ecm1Q61508 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.4■□□□□ 0.22
Ecm1Q61508 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.4■□□□□ 0.22
Ecm1Q61508 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ecm1Q61508 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ecm1Q61508 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm9522-201ENSMUST00000182394 926 ntBASIC16.39■□□□□ 0.21
Ecm1Q61508 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.39■□□□□ 0.21
Ecm1Q61508 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Gm6180-201ENSMUST00000065243 498 ntBASIC16.39■□□□□ 0.21
Ecm1Q61508 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ecm1Q61508 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Ecm1Q61508 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms