Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Xrcc1Q60596 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Xrcc1Q60596 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.25□□□□□ -0.13
Xrcc1Q60596 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.25□□□□□ -0.13
Xrcc1Q60596 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.25□□□□□ -0.13
Xrcc1Q60596 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.25□□□□□ -0.13
Xrcc1Q60596 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.25□□□□□ -0.13
Xrcc1Q60596 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Xrcc1Q60596 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.24□□□□□ -0.13
Xrcc1Q60596 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm24513-201ENSMUST00000174964 138 ntBASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm2756-201ENSMUST00000195851 400 ntBASIC14.24□□□□□ -0.13
Xrcc1Q60596 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Xrcc1Q60596 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Xrcc1Q60596 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms