Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Gm6244-201ENSMUST00000178732 841 ntBASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Shank3Q4ACU6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Gm14660-201ENSMUST00000119809 575 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Mir3102-201ENSMUST00000175555 104 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Prob1-201ENSMUST00000097619 3021 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank3Q4ACU6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Gm23931-201ENSMUST00000103842 109 ntBASIC18.23■□□□□ 0.51
Shank3Q4ACU6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank3Q4ACU6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Mir1982-201ENSMUST00000157368 74 ntBASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank3Q4ACU6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.21■□□□□ 0.51
Shank3Q4ACU6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms