Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Spg11Q3UHA3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Mir433-201ENSMUST00000093564 124 ntBASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Spg11Q3UHA3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm43947-201ENSMUST00000203019 959 ntBASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Spg11Q3UHA3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.58□□□□□ -0.23
Spg11Q3UHA3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms