Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf2Q3UAW9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.04□□□□□ -0.16
Brf2Q3UAW9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf2Q3UAW9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Brf2Q3UAW9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms