Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc4Q3TCX3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc4Q3TCX3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc4Q3TCX3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc4Q3TCX3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm7063-201ENSMUST00000186840 981 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Gm8396-201ENSMUST00000057361 823 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Khdc4Q3TCX3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Gm18246-201ENSMUST00000221023 728 ntBASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc4Q3TCX3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc4Q3TCX3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms