Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm4518-201ENSMUST00000182638 718 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm7506-201ENSMUST00000207758 815 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Gm9172-201ENSMUST00000212092 954 ntBASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ptchd3Q0EEE2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ptchd3Q0EEE2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms