Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Gm6973-201ENSMUST00000117080 721 ntBASIC14.88□□□□□ -0.03
Col6a2Q02788 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Gm43474-201ENSMUST00000196415 774 ntBASIC14.88□□□□□ -0.03
Col6a2Q02788 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.88□□□□□ -0.03
Col6a2Q02788 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a2Q02788 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.88□□□□□ -0.03
Col6a2Q02788 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a2Q02788 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.87□□□□□ -0.03
Col6a2Q02788 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a2Q02788 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a2Q02788 Gm5312-201ENSMUST00000203728 547 ntBASIC14.87□□□□□ -0.03
Col6a2Q02788 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a2Q02788 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col6a2Q02788 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.86□□□□□ -0.03
Col6a2Q02788 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.86□□□□□ -0.03
Col6a2Q02788 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.86□□□□□ -0.03
Col6a2Q02788 Gm15483-201ENSMUST00000120338 456 ntBASIC14.86□□□□□ -0.03
Col6a2Q02788 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Col6a2Q02788 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Col6a2Q02788 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col6a2Q02788 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.86□□□□□ -0.03
Col6a2Q02788 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.86□□□□□ -0.03
Col6a2Q02788 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a2Q02788 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col6a2Q02788 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a2Q02788 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms