Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.72□□□□□ -0.37
Col8a1Q00780 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col8a1Q00780 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col8a1Q00780 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a1Q00780 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm18766-201ENSMUST00000189811 808 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm44344-201ENSMUST00000200287 129 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm18062-201ENSMUST00000208020 547 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm18055-201ENSMUST00000208254 547 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm18049-201ENSMUST00000208909 581 ntBASIC12.71□□□□□ -0.37
Col8a1Q00780 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col8a1Q00780 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a1Q00780 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.71□□□□□ -0.37
Col8a1Q00780 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.71□□□□□ -0.38
Col8a1Q00780 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col8a1Q00780 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.71□□□□□ -0.38
Col8a1Q00780 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a1Q00780 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col8a1Q00780 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col8a1Q00780 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col8a1Q00780 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Gm18737-201ENSMUST00000173594 937 ntBASIC12.7□□□□□ -0.38
Col8a1Q00780 Gm9908-201ENSMUST00000211534 448 ntBASIC12.7□□□□□ -0.38
Col8a1Q00780 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col8a1Q00780 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a1Q00780 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.69□□□□□ -0.38
Col8a1Q00780 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col8a1Q00780 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col8a1Q00780 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col8a1Q00780 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms