Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.81□□□□□ -0.36
Smn1P97801 Gm15165-201ENSMUST00000118140 502 ntBASIC12.81□□□□□ -0.36
Smn1P97801 Gm4459-201ENSMUST00000118750 468 ntBASIC12.81□□□□□ -0.36
Smn1P97801 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.81□□□□□ -0.36
Smn1P97801 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Gm27867-201ENSMUST00000184778 125 ntBASIC12.81□□□□□ -0.36
Smn1P97801 Gm7506-201ENSMUST00000207758 815 ntBASIC12.81□□□□□ -0.36
Smn1P97801 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.81□□□□□ -0.36
Smn1P97801 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smn1P97801 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smn1P97801 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smn1P97801 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Gm8318-201ENSMUST00000182954 872 ntBASIC12.8□□□□□ -0.36
Smn1P97801 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smn1P97801 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smn1P97801 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smn1P97801 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.79□□□□□ -0.36
Smn1P97801 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.79□□□□□ -0.36
Smn1P97801 Gm23547-201ENSMUST00000158210 271 ntBASIC12.79□□□□□ -0.36
Smn1P97801 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.79□□□□□ -0.36
Smn1P97801 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.79□□□□□ -0.36
Smn1P97801 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.79□□□□□ -0.36
Smn1P97801 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smn1P97801 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smn1P97801 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smn1P97801 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smn1P97801 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.78□□□□□ -0.36
Smn1P97801 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smn1P97801 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.78□□□□□ -0.36
Smn1P97801 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Smn1P97801 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.78□□□□□ -0.36
Smn1P97801 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms