Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.42■□□□□ 0.38
Pkp1P97350 Gm16198-201ENSMUST00000118766 670 ntBASIC17.42■□□□□ 0.38
Pkp1P97350 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkp1P97350 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pkp1P97350 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Gm12134-201ENSMUST00000122109 520 ntBASIC17.41■□□□□ 0.38
Pkp1P97350 Gm23547-201ENSMUST00000158210 271 ntBASIC17.41■□□□□ 0.38
Pkp1P97350 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.41■□□□□ 0.38
Pkp1P97350 Gm18733-201ENSMUST00000173950 856 ntBASIC17.41■□□□□ 0.38
Pkp1P97350 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkp1P97350 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pkp1P97350 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pkp1P97350 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pkp1P97350 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pkp1P97350 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Gm14140-201ENSMUST00000119999 995 ntBASIC17.4■□□□□ 0.38
Pkp1P97350 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Pkp1P97350 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.4■□□□□ 0.38
Pkp1P97350 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.4■□□□□ 0.38
Pkp1P97350 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.4■□□□□ 0.38
Pkp1P97350 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Psmb5-202ENSMUST00000227257 622 ntBASIC17.4■□□□□ 0.38
Pkp1P97350 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pkp1P97350 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.4■□□□□ 0.38
Pkp1P97350 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.4■□□□□ 0.38
Pkp1P97350 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pkp1P97350 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Pkp1P97350 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkp1P97350 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pkp1P97350 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pkp1P97350 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pkp1P97350 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.39■□□□□ 0.37
Pkp1P97350 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Gm5177-201ENSMUST00000183092 997 ntBASIC17.39■□□□□ 0.37
Pkp1P97350 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.39■□□□□ 0.37
Pkp1P97350 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.39■□□□□ 0.37
Pkp1P97350 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkp1P97350 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pkp1P97350 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms