Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trim43bP86448 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.35■□□□□ 0.05
Trim43bP86448 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trim43bP86448 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim43bP86448 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Trim43bP86448 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43bP86448 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm13418-201ENSMUST00000119097 944 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm8825-201ENSMUST00000182565 998 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm4518-201ENSMUST00000182638 718 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm6089-201ENSMUST00000197666 938 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim43bP86448 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Trim43bP86448 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim43bP86448 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.34■□□□□ 0.05
Trim43bP86448 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43bP86448 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43bP86448 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43bP86448 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43bP86448 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43bP86448 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43bP86448 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43bP86448 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim43bP86448 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim43bP86448 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim43bP86448 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms