Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
Shox2P70390 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.74□□□□□ -0.05
Shox2P70390 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shox2P70390 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Shox2P70390 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.73□□□□□ -0.05
Shox2P70390 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shox2P70390 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.73□□□□□ -0.05
Shox2P70390 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Shox2P70390 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shox2P70390 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.73□□□□□ -0.05
Shox2P70390 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shox2P70390 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.73□□□□□ -0.05
Shox2P70390 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Shox2P70390 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shox2P70390 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shox2P70390 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.72□□□□□ -0.05
Shox2P70390 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.72□□□□□ -0.05
Shox2P70390 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shox2P70390 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shox2P70390 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shox2P70390 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms