Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm7292-201ENSMUST00000194706 2527 ntBASIC24.01■■□□□ 1.43
Cux2P70298 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC24.01■■□□□ 1.43
Cux2P70298 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Cux2P70298 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cux2P70298 Gm13050-201ENSMUST00000122149 1345 ntBASIC24■■□□□ 1.43
Cux2P70298 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC24■■□□□ 1.43
Cux2P70298 Gm5049-201ENSMUST00000195878 1590 ntBASIC24■■□□□ 1.43
Cux2P70298 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Cux2P70298 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC24■■□□□ 1.43
Cux2P70298 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cux2P70298 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cux2P70298 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC24■■□□□ 1.43
Cux2P70298 Gm4804-201ENSMUST00000182234 999 ntBASIC24■■□□□ 1.43
Cux2P70298 Gm19078-201ENSMUST00000206311 727 ntBASIC24■■□□□ 1.43
Cux2P70298 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cux2P70298 Gm6013-201ENSMUST00000212264 699 ntBASIC24■■□□□ 1.43
Cux2P70298 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC24■■□□□ 1.43
Cux2P70298 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cux2P70298 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cux2P70298 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC23.99■■□□□ 1.43
Cux2P70298 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cux2P70298 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC23.99■■□□□ 1.43
Cux2P70298 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC23.99■■□□□ 1.43
Cux2P70298 Gm8801-201ENSMUST00000173255 1064 ntBASIC23.99■■□□□ 1.43
Cux2P70298 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cux2P70298 Gm8565-201ENSMUST00000183259 1014 ntBASIC23.99■■□□□ 1.43
Cux2P70298 Gm27243-201ENSMUST00000183964 521 ntBASIC23.99■■□□□ 1.43
Cux2P70298 AC159747.1-201ENSMUST00000219903 265 ntBASIC23.99■■□□□ 1.43
Cux2P70298 AC154276.1-201ENSMUST00000228874 1299 ntBASIC23.99■■□□□ 1.43
Cux2P70298 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cux2P70298 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Cux2P70298 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Cux2P70298 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Cux2P70298 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Cux2P70298 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.98■■□□□ 1.43
Cux2P70298 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Cux2P70298 Gm29649-201ENSMUST00000185649 419 ntBASIC23.98■■□□□ 1.43
Cux2P70298 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Cux2P70298 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cux2P70298 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Cux2P70298 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Cux2P70298 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC23.97■■□□□ 1.43
Cux2P70298 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Gm38037-201ENSMUST00000192600 1624 ntBASIC23.97■■□□□ 1.43
Cux2P70298 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
Cux2P70298 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC23.97■■□□□ 1.43
Cux2P70298 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cux2P70298 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Cux2P70298 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Cux2P70298 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
Cux2P70298 Gm15376-201ENSMUST00000122258 783 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Rn7s1-201ENSMUST00000174924 300 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Rn7s2-201ENSMUST00000175032 300 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Gm26461-201ENSMUST00000175064 290 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Gm18056-201ENSMUST00000207670 568 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Gm18061-201ENSMUST00000208350 562 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Gm18063-201ENSMUST00000208529 568 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Gm18052-201ENSMUST00000208750 559 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Gm7553-201ENSMUST00000185805 1426 ntBASIC23.96■■□□□ 1.43
Cux2P70298 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC23.96■■□□□ 1.43
Cux2P70298 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cux2P70298 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms