Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm6P62313 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm6P62313 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.08□□□□□ -0.31
Lsm6P62313 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm6P62313 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Lsm6P62313 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm6P62313 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lsm6P62313 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Gm12008-201ENSMUST00000117791 755 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm6P62313 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm6P62313 Gm27300-201ENSMUST00000184085 97 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 Gm27335-201ENSMUST00000184758 97 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 Gm2651-201ENSMUST00000203560 838 ntBASIC13.08□□□□□ -0.32
Lsm6P62313 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm6P62313 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm6P62313 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Lsm6P62313 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Lsm6P62313 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.07□□□□□ -0.32
Lsm6P62313 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Lsm6P62313 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.07□□□□□ -0.32
Lsm6P62313 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm6P62313 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lsm6P62313 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.07□□□□□ -0.32
Lsm6P62313 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Lsm6P62313 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lsm6P62313 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm6P62313 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lsm6P62313 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.07□□□□□ -0.32
Lsm6P62313 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm6P62313 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm6P62313 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm6P62313 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Gm18733-201ENSMUST00000173950 856 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 Gm2272-201ENSMUST00000194903 582 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.06□□□□□ -0.32
Lsm6P62313 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm6P62313 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms