Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lmo4P61969 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lmo4P61969 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.02□□□□□ -0.49
Lmo4P61969 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.02□□□□□ -0.49
Lmo4P61969 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lmo4P61969 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lmo4P61969 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lmo4P61969 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lmo4P61969 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.01□□□□□ -0.49
Lmo4P61969 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.01□□□□□ -0.49
Lmo4P61969 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Mir7684-201ENSMUST00000183858 60 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Gm27680-201ENSMUST00000184192 160 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.01□□□□□ -0.49
Lmo4P61969 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Gm2451-201ENSMUST00000199447 999 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Gm10290-201ENSMUST00000200451 999 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Gm9063-201ENSMUST00000223299 582 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.01□□□□□ -0.49
Lmo4P61969 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lmo4P61969 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lmo4P61969 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.01□□□□□ -0.49
Lmo4P61969 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.01□□□□□ -0.49
Lmo4P61969 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lmo4P61969 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12□□□□□ -0.49
Lmo4P61969 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Lmo4P61969 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12□□□□□ -0.49
Lmo4P61969 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12□□□□□ -0.49
Lmo4P61969 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12□□□□□ -0.49
Lmo4P61969 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12□□□□□ -0.49
Lmo4P61969 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Gm21009-201ENSMUST00000197169 1669 ntBASIC12□□□□□ -0.49
Lmo4P61969 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lmo4P61969 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmo4P61969 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.99□□□□□ -0.49
Lmo4P61969 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Lmo4P61969 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmo4P61969 Gm24543-201ENSMUST00000103867 82 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms