Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.26□□□□□ -0.29
Sf3b6P59708 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Gm18622-201ENSMUST00000219361 595 ntBASIC13.26□□□□□ -0.29
Sf3b6P59708 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.26□□□□□ -0.29
Sf3b6P59708 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Gm10819-201ENSMUST00000099988 561 ntBASIC13.26□□□□□ -0.29
Sf3b6P59708 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Gm27357-201ENSMUST00000183754 135 ntBASIC13.25□□□□□ -0.29
Sf3b6P59708 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Gm18669-201ENSMUST00000216049 778 ntBASIC13.25□□□□□ -0.29
Sf3b6P59708 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sf3b6P59708 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.25□□□□□ -0.29
Sf3b6P59708 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm8344-201ENSMUST00000119813 856 ntBASIC13.24□□□□□ -0.29
Sf3b6P59708 Olfr129-201ENSMUST00000122318 993 ntBASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sf3b6P59708 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.24□□□□□ -0.29
Sf3b6P59708 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sf3b6P59708 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.23□□□□□ -0.29
Sf3b6P59708 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms