Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.3■□□□□ 0.04
SftpbP50405 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SftpbP50405 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SftpbP50405 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SftpbP50405 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SftpbP50405 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SftpbP50405 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SftpbP50405 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.29■□□□□ 0.04
SftpbP50405 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Carlr-201ENSMUST00000181515 2574 ntBASIC15.29■□□□□ 0.04
SftpbP50405 Gm11780-201ENSMUST00000136880 516 ntBASIC15.29■□□□□ 0.04
SftpbP50405 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Gm18669-201ENSMUST00000216049 778 ntBASIC15.29■□□□□ 0.04
SftpbP50405 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.29■□□□□ 0.04
SftpbP50405 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SftpbP50405 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SftpbP50405 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.28■□□□□ 0.04
SftpbP50405 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.28■□□□□ 0.04
SftpbP50405 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SftpbP50405 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.28■□□□□ 0.04
SftpbP50405 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
SftpbP50405 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.28■□□□□ 0.04
SftpbP50405 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SftpbP50405 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SftpbP50405 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SftpbP50405 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SftpbP50405 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.27■□□□□ 0.04
SftpbP50405 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.27■□□□□ 0.04
SftpbP50405 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.27■□□□□ 0.04
SftpbP50405 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.27■□□□□ 0.04
SftpbP50405 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SftpbP50405 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.27■□□□□ 0.03
SftpbP50405 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SftpbP50405 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SftpbP50405 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SftpbP50405 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SftpbP50405 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SftpbP50405 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SftpbP50405 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SftpbP50405 Gm12134-201ENSMUST00000122109 520 ntBASIC15.26■□□□□ 0.03
SftpbP50405 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms