Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.41□□□□□ -0.1
Tnfsf4P43488 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.41□□□□□ -0.1
Tnfsf4P43488 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.41□□□□□ -0.1
Tnfsf4P43488 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.41□□□□□ -0.1
Tnfsf4P43488 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf4P43488 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.4□□□□□ -0.1
Tnfsf4P43488 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Gm23547-201ENSMUST00000158210 271 ntBASIC14.4□□□□□ -0.1
Tnfsf4P43488 Gm18489-201ENSMUST00000172565 551 ntBASIC14.4□□□□□ -0.1
Tnfsf4P43488 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.4□□□□□ -0.1
Tnfsf4P43488 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.4□□□□□ -0.1
Tnfsf4P43488 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf4P43488 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.39□□□□□ -0.11
Tnfsf4P43488 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.39□□□□□ -0.11
Tnfsf4P43488 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf4P43488 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf4P43488 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms