Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm20445-201ENSMUST00000061905 565 ntBASIC14.11□□□□□ -0.15
Cdx2P43241 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdx2P43241 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Cdx2P43241 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cdx2P43241 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm15653-201ENSMUST00000119247 907 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm29310-201ENSMUST00000185468 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21825-201ENSMUST00000185728 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm29109-201ENSMUST00000185895 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21896-201ENSMUST00000186520 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21873-201ENSMUST00000186728 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21794-201ENSMUST00000187056 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21880-201ENSMUST00000187275 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21826-201ENSMUST00000187451 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21198-201ENSMUST00000188393 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21749-201ENSMUST00000189343 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21901-201ENSMUST00000189568 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm29424-201ENSMUST00000189716 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm28599-201ENSMUST00000189838 694 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21867-201ENSMUST00000189917 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm29269-201ENSMUST00000190087 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21722-201ENSMUST00000190153 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm28423-201ENSMUST00000190701 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21899-201ENSMUST00000190745 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21910-201ENSMUST00000191163 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21849-201ENSMUST00000191571 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm28678-201ENSMUST00000191593 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm20910-201ENSMUST00000193268 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm21871-201ENSMUST00000194621 696 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm6745-201ENSMUST00000199216 526 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm43703-201ENSMUST00000200523 763 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Gm45098-201ENSMUST00000207179 657 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm16476-201ENSMUST00000221544 139 ntBASIC14.1□□□□□ -0.15
Cdx2P43241 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cdx2P43241 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdx2P43241 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
Cdx2P43241 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdx2P43241 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx2P43241 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cdx2P43241 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdx2P43241 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdx2P43241 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdx2P43241 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.09□□□□□ -0.15
Cdx2P43241 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdx2P43241 Gm23984-201ENSMUST00000157139 203 ntBASIC14.09□□□□□ -0.15
Cdx2P43241 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdx2P43241 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.09□□□□□ -0.15
Cdx2P43241 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdx2P43241 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdx2P43241 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.09□□□□□ -0.15
Cdx2P43241 Dupd1-202ENSMUST00000224735 548 ntBASIC14.09□□□□□ -0.15
Cdx2P43241 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx2P43241 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms