Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc6a1P31648 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc6a1P31648 Matn2-206ENSMUST00000228570 2798 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Gm27357-201ENSMUST00000183754 135 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Gm17807-201ENSMUST00000186869 298 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Ank2-226ENSMUST00000189368 339 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Gm10566-201ENSMUST00000086739 996 ntBASIC12.86□□□□□ -0.35
Slc6a1P31648 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc6a1P31648 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc6a1P31648 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Mir770-201ENSMUST00000103252 94 ntBASIC12.85□□□□□ -0.35
Slc6a1P31648 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Gm18669-201ENSMUST00000216049 778 ntBASIC12.85□□□□□ -0.35
Slc6a1P31648 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.85□□□□□ -0.35
Slc6a1P31648 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Slc6a1P31648 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Slc6a1P31648 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc6a1P31648 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Gm11336-201ENSMUST00000118168 334 ntBASIC12.84□□□□□ -0.35
Slc6a1P31648 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Slc6a1P31648 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a1P31648 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms