Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.81□□□□□ -0.2
Nedd8P29595 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Gm37856-201ENSMUST00000191634 999 ntBASIC13.81□□□□□ -0.2
Nedd8P29595 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.81□□□□□ -0.2
Nedd8P29595 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Nedd8P29595 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nedd8P29595 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.81□□□□□ -0.2
Nedd8P29595 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nedd8P29595 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.81□□□□□ -0.2
Nedd8P29595 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Nedd8P29595 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Gm44430-201ENSMUST00000203376 995 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 Gm3375-201ENSMUST00000203929 796 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.8□□□□□ -0.2
Nedd8P29595 Gm7213-201ENSMUST00000215977 950 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.8□□□□□ -0.2
Nedd8P29595 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nedd8P29595 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd8P29595 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nedd8P29595 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nedd8P29595 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.79□□□□□ -0.2
Nedd8P29595 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd8P29595 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd8P29595 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Nedd8P29595 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.79□□□□□ -0.2
Nedd8P29595 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.79□□□□□ -0.2
Nedd8P29595 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nedd8P29595 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nedd8P29595 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd8P29595 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms