Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.92□□□□□ -0.18
Clk1P22518 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Gm13884-201ENSMUST00000118103 829 ntBASIC13.92□□□□□ -0.18
Clk1P22518 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Gm6550-201ENSMUST00000187574 993 ntBASIC13.92□□□□□ -0.18
Clk1P22518 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.92□□□□□ -0.18
Clk1P22518 AV026068-213ENSMUST00000223675 1171 ntBASIC13.92□□□□□ -0.18
Clk1P22518 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.92□□□□□ -0.18
Clk1P22518 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Clk1P22518 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk1P22518 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.92□□□□□ -0.18
Clk1P22518 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.91□□□□□ -0.18
Clk1P22518 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Clk1P22518 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Clk1P22518 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.91□□□□□ -0.18
Clk1P22518 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.91□□□□□ -0.18
Clk1P22518 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clk1P22518 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clk1P22518 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Clk1P22518 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk1P22518 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clk1P22518 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.9□□□□□ -0.18
Clk1P22518 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.9□□□□□ -0.18
Clk1P22518 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.9□□□□□ -0.18
Clk1P22518 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk1P22518 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.9□□□□□ -0.18
Clk1P22518 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk1P22518 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clk1P22518 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clk1P22518 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.89□□□□□ -0.19
Clk1P22518 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Clk1P22518 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms