Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Mir6956-201ENSMUST00000183598 62 ntBASIC17.24■□□□□ 0.35
Usp53P15975 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp53P15975 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp53P15975 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Usp53P15975 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp53P15975 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp53P15975 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp53P15975 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp53P15975 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Gm22065-201ENSMUST00000103753 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm22066-201ENSMUST00000103761 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24932-201ENSMUST00000103763 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24115-201ENSMUST00000103799 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm22190-201ENSMUST00000103827 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm22191-201ENSMUST00000103831 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24721-201ENSMUST00000103849 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm28018-201ENSMUST00000103869 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm26399-201ENSMUST00000103937 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp53P15975 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Gm25349-201ENSMUST00000177728 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm23616-201ENSMUST00000177797 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm25871-201ENSMUST00000177816 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24752-201ENSMUST00000178240 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24496-201ENSMUST00000178287 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm25649-201ENSMUST00000178476 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm25548-201ENSMUST00000178681 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm23147-201ENSMUST00000178841 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm26095-201ENSMUST00000179270 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm22171-201ENSMUST00000179283 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm23936-201ENSMUST00000179354 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm22619-201ENSMUST00000179516 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm25255-201ENSMUST00000179579 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24755-201ENSMUST00000179691 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm26506-201ENSMUST00000179692 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm25086-201ENSMUST00000179931 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm23243-201ENSMUST00000180047 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24659-201ENSMUST00000180212 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm24169-201ENSMUST00000180244 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm23689-201ENSMUST00000180354 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm27359-201ENSMUST00000184153 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm27785-201ENSMUST00000184268 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm27466-201ENSMUST00000184396 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm27703-201ENSMUST00000184836 110 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp53P15975 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp53P15975 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Gm5779-201ENSMUST00000218467 910 ntBASIC17.23■□□□□ 0.35
Usp53P15975 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Usp53P15975 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp53P15975 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Usp53P15975 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Usp53P15975 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp53P15975 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp53P15975 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Usp53P15975 Auts2-212ENSMUST00000178555 309 ntBASIC17.22■□□□□ 0.35
Usp53P15975 Gm7774-201ENSMUST00000200064 533 ntBASIC17.22■□□□□ 0.35
Usp53P15975 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.22■□□□□ 0.35
Usp53P15975 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.22■□□□□ 0.35
Usp53P15975 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp53P15975 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp53P15975 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp53P15975 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp53P15975 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp53P15975 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms