Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd44P15379 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.67■□□□□ 0.1
Cd44P15379 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cd44P15379 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Gm18489-201ENSMUST00000172565 551 ntBASIC15.67■□□□□ 0.1
Cd44P15379 Ank2-226ENSMUST00000189368 339 ntBASIC15.67■□□□□ 0.1
Cd44P15379 Gm9682-201ENSMUST00000197505 556 ntBASIC15.67■□□□□ 0.1
Cd44P15379 Gm6089-201ENSMUST00000197666 938 ntBASIC15.67■□□□□ 0.1
Cd44P15379 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd44P15379 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cd44P15379 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd44P15379 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.66■□□□□ 0.1
Cd44P15379 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.66■□□□□ 0.1
Cd44P15379 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.66■□□□□ 0.1
Cd44P15379 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cd44P15379 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd44P15379 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd44P15379 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd44P15379 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Cd44P15379 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd44P15379 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Cd44P15379 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.65■□□□□ 0.1
Cd44P15379 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.65■□□□□ 0.1
Cd44P15379 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.65■□□□□ 0.1
Cd44P15379 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.65■□□□□ 0.1
Cd44P15379 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd44P15379 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cd44P15379 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms