Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.29■□□□□ 0.04
Rb1P13405 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rb1P13405 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rb1P13405 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rb1P13405 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.28■□□□□ 0.04
Rb1P13405 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.28■□□□□ 0.04
Rb1P13405 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.28■□□□□ 0.04
Rb1P13405 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rb1P13405 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rb1P13405 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rb1P13405 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.27■□□□□ 0.04
Rb1P13405 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Mir6956-201ENSMUST00000183598 62 ntBASIC15.27■□□□□ 0.04
Rb1P13405 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Gm45612-201ENSMUST00000211320 160 ntBASIC15.27■□□□□ 0.04
Rb1P13405 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Rb1P13405 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rb1P13405 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.27■□□□□ 0.03
Rb1P13405 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rb1P13405 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.03
Rb1P13405 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rb1P13405 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.27■□□□□ 0.03
Rb1P13405 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rb1P13405 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Gm6257-201ENSMUST00000163864 910 ntBASIC15.26■□□□□ 0.03
Rb1P13405 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rb1P13405 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rb1P13405 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms