Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.26■□□□□ 0.19
Chmp6P0C0A3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp6P0C0A3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp6P0C0A3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Gm18246-201ENSMUST00000221023 728 ntBASIC16.24■□□□□ 0.19
Chmp6P0C0A3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp6P0C0A3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms