Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.13□□□□□ -0.31
P04224 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.13□□□□□ -0.31
P04224 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.13□□□□□ -0.31
P04224 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
P04224 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04224 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P04224 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
P04224 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.12□□□□□ -0.31
P04224 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.12□□□□□ -0.31
P04224 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gm6257-201ENSMUST00000163864 910 ntBASIC13.12□□□□□ -0.31
P04224 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.12□□□□□ -0.31
P04224 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.12□□□□□ -0.31
P04224 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.12□□□□□ -0.31
P04224 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P04224 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P04224 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P04224 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04224 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P04224 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Gm15565-201ENSMUST00000118890 427 ntBASIC13.11□□□□□ -0.31
P04224 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.11□□□□□ -0.31
P04224 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.11□□□□□ -0.31
P04224 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P04224 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.11□□□□□ -0.31
P04224 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.11□□□□□ -0.31
P04224 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.11□□□□□ -0.31
P04224 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
P04224 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04224 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P04224 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P04224 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.1□□□□□ -0.31
P04224 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Mir770-201ENSMUST00000103252 94 ntBASIC13.1□□□□□ -0.31
P04224 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P04224 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.1□□□□□ -0.31
P04224 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.1□□□□□ -0.31
P04224 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P04224 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04224 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P04224 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.1□□□□□ -0.31
P04224 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms