Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.3□□□□□ -0.12
Hcn3O88705 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hcn3O88705 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Mir3081-201ENSMUST00000175305 84 ntBASIC14.3□□□□□ -0.12
Hcn3O88705 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.3□□□□□ -0.12
Hcn3O88705 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.3□□□□□ -0.12
Hcn3O88705 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.3□□□□□ -0.12
Hcn3O88705 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Hcn3O88705 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.3□□□□□ -0.12
Hcn3O88705 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn3O88705 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Hcn3O88705 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hcn3O88705 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm13312-201ENSMUST00000119631 718 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.29□□□□□ -0.12
Hcn3O88705 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm25406-201ENSMUST00000157599 105 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm27357-201ENSMUST00000183754 135 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Gm17807-201ENSMUST00000186869 298 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Ank2-226ENSMUST00000189368 339 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm10819-201ENSMUST00000099988 561 ntBASIC14.29□□□□□ -0.12
Hcn3O88705 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn3O88705 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hcn3O88705 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hcn3O88705 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hcn3O88705 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.28□□□□□ -0.12
Hcn3O88705 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.28□□□□□ -0.12
Hcn3O88705 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.28□□□□□ -0.12
Hcn3O88705 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.28□□□□□ -0.12
Hcn3O88705 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.28□□□□□ -0.12
Hcn3O88705 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms