Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops4O88544 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.79□□□□□ -0.2
Cops4O88544 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Gm12008-201ENSMUST00000117791 755 ntBASIC13.79□□□□□ -0.2
Cops4O88544 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.79□□□□□ -0.2
Cops4O88544 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.79□□□□□ -0.2
Cops4O88544 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cops4O88544 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops4O88544 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops4O88544 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cops4O88544 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cops4O88544 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cops4O88544 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.78□□□□□ -0.2
Cops4O88544 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.78□□□□□ -0.2
Cops4O88544 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.78□□□□□ -0.2
Cops4O88544 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.78□□□□□ -0.2
Cops4O88544 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Cops4O88544 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.78□□□□□ -0.2
Cops4O88544 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cops4O88544 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cops4O88544 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops4O88544 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cops4O88544 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops4O88544 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops4O88544 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.77□□□□□ -0.2
Cops4O88544 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Rprl3-201ENSMUST00000157400 290 ntBASIC13.77□□□□□ -0.21
Cops4O88544 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.77□□□□□ -0.21
Cops4O88544 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cops4O88544 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.77□□□□□ -0.21
Cops4O88544 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.77□□□□□ -0.21
Cops4O88544 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cops4O88544 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Cops4O88544 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms