Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarce1O54941 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smarce1O54941 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smarce1O54941 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smarce1O54941 Gm37153-201ENSMUST00000193637 231 ntBASIC17.74■□□□□ 0.43
Smarce1O54941 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.74■□□□□ 0.43
Smarce1O54941 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.74■□□□□ 0.43
Smarce1O54941 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarce1O54941 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarce1O54941 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smarce1O54941 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarce1O54941 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Gm23547-201ENSMUST00000158210 271 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smarce1O54941 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smarce1O54941 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.73■□□□□ 0.43
Smarce1O54941 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarce1O54941 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Smarce1O54941 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarce1O54941 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarce1O54941 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarce1O54941 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.72■□□□□ 0.43
Smarce1O54941 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smarce1O54941 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.72■□□□□ 0.43
Smarce1O54941 Gm13418-201ENSMUST00000119097 944 ntBASIC17.72■□□□□ 0.43
Smarce1O54941 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.72■□□□□ 0.43
Smarce1O54941 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.72■□□□□ 0.43
Smarce1O54941 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.72■□□□□ 0.43
Smarce1O54941 Gm9682-201ENSMUST00000197505 556 ntBASIC17.72■□□□□ 0.43
Smarce1O54941 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarce1O54941 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarce1O54941 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarce1O54941 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarce1O54941 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Smarce1O54941 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarce1O54941 Gm6089-201ENSMUST00000197666 938 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms