Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.57□□□□□ -0.08
Npc1O35604 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Npc1O35604 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Npc1O35604 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Npc1O35604 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.56□□□□□ -0.08
Npc1O35604 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.56□□□□□ -0.08
Npc1O35604 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Npc1O35604 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Npc1O35604 Gm44492-201ENSMUST00000197012 141 ntBASIC14.56□□□□□ -0.08
Npc1O35604 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.56□□□□□ -0.08
Npc1O35604 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.56□□□□□ -0.08
Npc1O35604 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Npc1O35604 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.56□□□□□ -0.08
Npc1O35604 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Npc1O35604 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.55□□□□□ -0.08
Npc1O35604 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Npc1O35604 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Gm15427-201ENSMUST00000117288 531 ntBASIC14.55□□□□□ -0.08
Npc1O35604 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.55□□□□□ -0.08
Npc1O35604 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Npc1O35604 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.55□□□□□ -0.08
Npc1O35604 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Npc1O35604 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Npc1O35604 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Npc1O35604 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.54□□□□□ -0.08
Npc1O35604 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.54□□□□□ -0.08
Npc1O35604 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.54□□□□□ -0.08
Npc1O35604 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Npc1O35604 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Npc1O35604 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npc1O35604 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.54□□□□□ -0.08
Npc1O35604 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.54□□□□□ -0.08
Npc1O35604 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Npc1O35604 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms